Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Vmn2r105 ENSMUSG00000091670

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Description

vomeronasal 2, receptor 105 [Source:MGI Symbol;Acc:MGI:3646973]

Gene Synonyms

EG627743

Location

Chromosome 17: 20,422,583-20,455,314 reverse strand.

GRCm39:CM001010.3

About this gene

This gene has 8 transcripts (splice variants), 133 orthologues and 128 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000167382.2	Vmn2r105-201	2583	860aa	ENSMUSP00000129762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49982	E9Q3A5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000233786.3	Vmn2r105-207	9899	564aa	ENSMUSP00000156857.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WD54	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000233461.3	Vmn2r105-205	8666	858aa	ENSMUSP00000156971.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W8C2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSMUST00000233950.3	Vmn2r105-208	8570	826aa	ENSMUSP00000156902.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W879	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000232877.3	Vmn2r105-204	8555	828aa	ENSMUSP00000156813.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WD24	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000233468.3	Vmn2r105-206	7874	594aa	ENSMUSP00000156685.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WCT8	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000232768.3	Vmn2r105-202	7784	564aa	ENSMUSP00000156604.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2W7M0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENSMUST00000232803.3	Vmn2r105-203	3720	551aa	ENSMUSP00000156599.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A3B2WCN5	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data