Gene: Sh2d4a ENSMUSG00000053886

Description

SH2 domain containing 4A [Source:MGI Symbol;Acc:MGI:1919531]

Gene Synonyms

2210402M20Rik, SH2A

Location

Chromosome 8: 68,729,219-68,800,351 forward strand.

GRCm39:CM001001.3

About this gene

This gene has 2 transcripts (splice variants), 230 orthologues, 4 paralogues and is associated with 1 phenotype.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000066594.4	Sh2d4a-201	2718	421aa	ENSMUSP00000070825.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS52564	Q9D7V1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000212166.2	Sh2d4a-202	1600	390aa	ENSMUSP00000148702.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1D5RMA9	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,