Gene: Cnrip1 ENSMUSG00000044629

Description

cannabinoid receptor interacting protein 1 [Source:MGI Symbol;Acc:MGI:1917505]

Gene Synonyms

1500041B16Rik, 3110054C06Rik, 5330437A18Rik

Location

Chromosome 11: 17,001,586-17,029,371 forward strand.

GRCm39:CM001004.3

About this gene

This gene has 3 transcripts (splice variants), 260 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000131515.2	Cnrip1-202	850	184aa	ENSMUSP00000122150.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F7C0H6 Q9CW19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000058159.6	Cnrip1-201	1654	164aa	ENSMUSP00000050036.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24447	Q5M8N0	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000135637.2	Cnrip1-203	2153	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,