Gene: Hand1 ENSMUSG00000037335

Description

heart and neural crest derivatives expressed 1 [Source:MGI Symbol;Acc:MGI:103577]

Gene Synonyms

Ehand1, Hxt, Th1, Thing1, bHLHa27, eHAND

Location

Chromosome 11: 57,719,531-57,723,644 reverse strand.

GRCm39:CM001004.3

About this gene

This gene has 3 transcripts (splice variants), 203 orthologues, 13 paralogues and is associated with 58 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000036917.3	Hand1-201	1904	216aa	ENSMUSP00000046999.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24721	Q5SQG1 Q64279	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000160392.9	Hand1-203	1806	216aa	ENSMUSP00000124951.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS24721	Q5SQG1 Q64279	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000108845.3	Hand1-202	354	31aa	ENSMUSP00000104473.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q5SQG0	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,