Gene: Stox1 ENSMUSG00000036923

Description

storkhead box 1 [Source:MGI Symbol;Acc:MGI:2684909]

Gene Synonyms

4732470K04Rik

Location

Chromosome 10: 62,494,822-62,561,907 reverse strand.

GRCm39:CM001003.3

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues, 1 paralogue and is associated with 7 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000133371.8	Stox1-202	3510	990aa	ENSMUSP00000114652.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS48580	B2RQL2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000148720.8	Stox1-203	1012	136aa	ENSMUSP00000116180.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6QZ35	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000126979.2	Stox1-201	507	39aa	ENSMUSP00000114348.2	Nonsense mediated decay		F6YZ72	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,