Gene: Hhatl ENSMUSG00000032523

Description

hedgehog acyltransferase-like [Source:MGI Symbol;Acc:MGI:1922020]

Gene Synonyms

1110011D13Rik, Gup1, Mg56, Mitsugumin 56

Location

Chromosome 9: 121,613,082-121,621,573 reverse strand.

GRCm39:CM001002.3

About this gene

This gene has 6 transcripts (splice variants), 248 orthologues, 1 paralogue and is associated with 20 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000035110.11	Hhatl-201	1870	503aa	ENSMUSP00000035110.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23638	Q9D1G3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000163981.3	Hhatl-202	1744	503aa	ENSMUSP00000131971.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS23638	Q9D1G3	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000214768.2	Hhatl-203	652	157aa	ENSMUSP00000149486.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SRJ1	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000217652.2	Hhatl-206	409	11aa	ENSMUSP00000150721.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SUF7	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000215910.2	Hhatl-205	398	64aa	ENSMUSP00000149350.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SR86	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000215477.2	Hhatl-204	391	64aa	ENSMUSP00000150866.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A1L1SR86	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,