Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
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Genetic Variation
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External references
Supporting evidence
ID History
- Gene history

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Gene: Endou ENSMUSG00000022468

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Description

endonuclease, polyU-specific [Source:MGI Symbol;Acc:MGI:97746]

Gene Synonyms

Pp11r, Tcl-30

Location

Chromosome 15: 97,608,896-97,629,220 reverse strand.

GRCm39:CM001008.3

About this gene

This gene has 3 transcripts (splice variants), 210 orthologues and is associated with 2 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000023105.5	Endou-201	2408	454aa	ENSMUSP00000023105.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27783	Q3V188-2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000100249.10	Endou-202	1467	412aa	ENSMUSP00000097820.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS49712	Q3V188	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230430.2	Endou-203	1668	119aa	ENSMUSP00000155246.2	Nonsense mediated decay		A0A2R8VHM5	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data