Gene: Tfap4 ENSMUSG00000005718

Description

transcription factor AP4 [Source:MGI Symbol;Acc:MGI:103239]

Gene Synonyms

AP-4, D930048N17Rik, Tcfap4, bHLHc41

Location

Chromosome 16: 4,362,525-4,377,718 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 3 transcripts (splice variants), 197 orthologues, 3 paralogues and is associated with 34 phenotypes.

Transcripts

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Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000005862.9	Tfap4-201	2247	338aa	ENSMUSP00000005862.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27919	Q9JIZ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000230875.2	Tfap4-203	809	199aa	ENSMUSP00000155303.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W6R9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000229956.2	Tfap4-202	788	214aa	ENSMUSP00000155803.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VI80	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,