Transcript: ENST00000710040.1 PQBP1-228

Description

polyglutamine binding protein 1 [Source:HGNC Symbol;Acc:HGNC:9330]

Gene Synonyms

MRX2, MRX55, MRXS3, MRXS8, RENS1, SHS

Location

Scaffold HSCHRX_3_CTG3: 56,777-62,237 forward strand.

About this transcript

This transcript has 3 exons and maps to 574 oligo probes.

Gene

This transcript is a product of gene ENSG00000292208.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000710032.1	PQBP1-220	1951	265aa	ENSP00000518005.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710038.1	PQBP1-226	1428	265aa	ENSP00000518009.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710035.1	PQBP1-223	1028	265aa	ENSP00000518007.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710046.1	PQBP1-234	962	265aa	ENSP00000518015.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710042.1	PQBP1-230	938	265aa	ENSP00000518012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710044.1	PQBP1-232	917	265aa	ENSP00000518014.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0S2Z4V5	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710033.1	PQBP1-221	760	170aa	ENSP00000518006.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710039.1	PQBP1-227	664	170aa	ENSP00000518010.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710047.1	PQBP1-235	538	62aa	ENSP00000518016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000710037.1	PQBP1-225	2028	67aa	ENSP00000518008.1	Nonsense mediated decay	-	-	-
ENST00000710041.1	PQBP1-229	834	149aa	ENSP00000518011.1	Nonsense mediated decay	-	-	-
ENST00000710049.1	PQBP1-237	812	128aa	ENSP00000518017.1	Nonsense mediated decay	-	-	-
ENST00000710043.1	PQBP1-231	784	149aa	ENSP00000518013.1	Nonsense mediated decay	-	-	-
ENST00000710040.1	PQBP1-228	2371	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000710034.1	PQBP1-222	2013	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000710036.1	PQBP1-224	1974	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000710045.1	PQBP1-233	1526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000710048.1	PQBP1-236	1144	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000710050.1	PQBP1-238	1012	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 2,371 bps,

Version

ENST00000710040.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000710040.1 PQBP1-228

Summary

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Transcript: ENST00000710040.1 PQBP1-228

Summary

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