Transcript: ENST00000648089.1 CCDC144NL-205

Description

CCDC144A N-terminal pseudogene [Source:HGNC Symbol;Acc:HGNC:33735]

Gene Synonyms

MGC87631

Location

Chromosome 17: 20,863,478-20,895,953 reverse strand.

About this transcript

This transcript has 4 exons, is associated with 22565 variant alleles and maps to 301 oligo probes.

Gene

This transcript is a product of gene ENSG00000291074.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000327925.6	CCDC144NL-202	2823	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000648089.1	CCDC144NL-205	2534	No protein	-	lncRNA	-	-
ENST00000700843.1	CCDC144NL-206	907	No protein	-	lncRNA	-	-
ENST00000700884.1	CCDC144NL-207	779	No protein	-	lncRNA	-	-
ENST00000539484.1	CCDC144NL-204	751	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000539177.1	CCDC144NL-203	443	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 2,534 bps,

Version

ENST00000648089.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000648089.1 CCDC144NL-205

Summary

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Transcript: ENST00000648089.1 CCDC144NL-205

Summary

About Us

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