Transcript: ENST00000672944.1 GALNT9-217

Description

polypeptide N-acetylgalactosaminyltransferase 9 [Source:HGNC Symbol;Acc:HGNC:4131]

Gene Synonyms

GALNAC-T9

Location

Scaffold HG2246_HG2248_HG2276_PATCH: 103,401-235,949 reverse strand.

About this transcript

This transcript has 11 exons, is annotated with 14 domains and features and maps to 434 oligo probes.

Gene

This transcript is a product of gene ENSG00000288490.1 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000672944.1	GALNT9-217	2933	603aa	ENSP00000500791.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000671997.1	GALNT9-212	1727	237aa	ENSP00000500654.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9HCQ5-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672816.1	GALNT9-215	1727	376aa	ENSP00000500049.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000673376.1	GALNT9-219	1001	237aa	ENSP00000500593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9HCQ5-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000672682.1	GALNT9-214	897	96aa	ENSP00000500726.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000672032.1	GALNT9-213	624	54aa	ENSP00000500068.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000672872.1	GALNT9-216	2532	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000671851.1	GALNT9-211	582	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000673497.1	GALNT9-220	1693	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000673050.1	GALNT9-218	556	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 2,933 bps, Translation length: 603 residues

Version

ENST00000672944.1

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000672944.1 GALNT9-217

Summary

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Transcript: ENST00000672944.1 GALNT9-217

Summary

About Us

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