Transcript: ENST00000644932.1 AGBL2-220

Description

AGBL carboxypeptidase 2 [Source:HGNC Symbol;Acc:HGNC:26296]

Gene Synonyms

CCP2, FLJ23598

Location

Scaffold HG2114_PATCH: 91,958-122,737 reverse strand.

About this transcript

This transcript has 9 exons and maps to 323 oligo probes.

Gene

This transcript is a product of gene ENSG00000285501.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000644455.1	AGBL2-219	3295	904aa	ENSP00000496373.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000645431.2	AGBL2-222	3586	902aa	ENSP00000494229.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5U5Z8-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000643952.1	AGBL2-218	2929	824aa	ENSP00000493525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642912.1	AGBL2-215	1288	331aa	ENSP00000493868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000643830.1	AGBL2-217	927	95aa	ENSP00000496060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000645554.1	AGBL2-223	552	148aa	ENSP00000496065.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000647499.1	AGBL2-227	479	32aa	ENSP00000494925.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000644932.1	AGBL2-220	1798	126aa	ENSP00000493947.1	Nonsense mediated decay	-	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000645934.1	AGBL2-224	550	61aa	ENSP00000494245.1	Nonsense mediated decay	-	-	-
ENST00000642469.1	AGBL2-214	2617	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000645178.1	AGBL2-221	592	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000646890.1	AGBL2-226	538	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000643392.1	AGBL2-216	305	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000646211.1	AGBL2-225	901	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 2, Transcript length: 1,798 bps, Translation length: 126 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENST00000644932.1

Type

Nonsense mediated decay

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENST00000644932.1 AGBL2-220

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Transcript: ENST00000644932.1 AGBL2-220

Summary

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