Transcript: ENST00000644496.1 SLC9C1-209

Description

solute carrier family 9 member C1 [Source:HGNC Symbol;Acc:HGNC:31401]

Gene Synonyms

NHE, SLC9A10

Location

About this transcript

This transcript has 22 exons, is annotated with 1 domain and feature and maps to 477 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000642317.2	SLC9C1-206	4119	1177aa	ENSP00000495147.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4G0N8-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000647463.1	SLC9C1-210	3979	1129aa	ENSP00000495048.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4G0N8-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642787.1	SLC9C1-207	521	85aa	ENSP00000496221.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C9J3M6	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000644496.1	SLC9C1-209	2733	241aa	ENSP00000494242.1	Nonsense mediated decay	F8WCJ0	-	-
ENST00000643172.2	SLC9C1-208	901	64aa	ENSP00000518750.1	Nonsense mediated decay	-	-	-

Summary

Statistics

Exons: 22, Coding exons: 7, Transcript length: 2,733 bps, Translation length: 241 residues

Version

ENST00000644496.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.