Transcript: ENST00000647400.1 EPHA1-214

Description

EPH receptor A1 [Source:HGNC Symbol;Acc:HGNC:3385]

Gene Synonyms

EPH, EPHT, EPHT1

Location

Scaffold HG708_PATCH: 10,775-28,169 reverse strand.

About this transcript

This transcript has 16 exons and maps to 570 oligo probes.

Gene

This transcript is a product of gene ENSG00000284816.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000645847.2	EPHA1-212	3310	976aa	ENSP00000494931.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P21709-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000642708.1	EPHA1-208	651	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000647400.1	EPHA1-214	2922	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000644029.1	EPHA1-210	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000645510.1	EPHA1-211	753	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000643917.1	EPHA1-209	686	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000646228.1	EPHA1-213	568	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 16, Coding exons: 0, Transcript length: 2,922 bps,

Version

ENST00000647400.1

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000647400.1 EPHA1-214

Summary

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Transcript: ENST00000647400.1 EPHA1-214

Summary

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