Transcript: ENST00000629431.2 CACFD1-212

Description

calcium channel flower domain containing 1 [Source:HGNC Symbol;Acc:HGNC:1365]

Gene Synonyms

C9ORF7, D9S2135, FLOWER

Location

Scaffold HG2030_PATCH: 286,081-296,942 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features and maps to 538 oligo probes.

Gene

This transcript is a product of gene ENSG00000280479.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000630997.2	CACFD1-214	2880	233aa	ENSP00000485922.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UGQ2-4	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000629431.2	CACFD1-212	2794	172aa	ENSP00000486696.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UGQ2-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000627083.2	CACFD1-211	2754	191aa	ENSP00000486812.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UGQ2-3	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000625979.2	CACFD1-209	2688	130aa	ENSP00000486098.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9UGQ2-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000630697.1	CACFD1-213	356	114aa	ENSP00000486907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000626867.1	CACFD1-210	795	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000625786.2	CACFD1-208	689	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,794 bps, Translation length: 172 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9UGQ2

Version

ENST00000629431.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000629431.2 CACFD1-212

Summary

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Transcript: ENST00000629431.2 CACFD1-212

Summary

About Us

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