Transcript: ENST00000573308.5 TAPT1-AS1-202

Description

TAPT1 antisense RNA 1 (head to head) [Source:HGNC Symbol;Acc:HGNC:26832]

Gene Synonyms

FLJ39653

Location

Chromosome 4: 16,226,685-16,256,744 forward strand.

About this transcript

This transcript has 3 exons, is associated with 13281 variant alleles and maps to 187 oligo probes.

Gene

This transcript is a product of gene ENSG00000263327.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000573950.5	TAPT1-AS1-203	510	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000570786.1	TAPT1-AS1-201	2165	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000573308.5	TAPT1-AS1-202	1031	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,031 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000573308.5

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000573308.5 TAPT1-AS1-202

Summary

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Transcript: ENST00000573308.5 TAPT1-AS1-202

Summary

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