Transcript: ENST00000588550.1 LINC00484-208

Description

long intergenic non-protein coding RNA 484 [Source:HGNC Symbol;Acc:HGNC:27862]

Gene Synonyms

C9ORF73

Location

Chromosome 9: 91,162,498-91,163,331 forward strand.

About this transcript

This transcript has 1 exon, is associated with 341 variant alleles and maps to 77 oligo probes.

Gene

This transcript is a product of gene ENSG00000235641.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000659376.1	LINC00484-211	3990	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000423719.3	LINC00484-207	3023	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000588550.1	LINC00484-208	834	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000609752.1	LINC00484-210	591	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000608240.1	LINC00484-209	436	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 834 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000588550.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported only [Definitions]

Transcript: ENST00000588550.1 LINC00484-208

Summary

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Transcript: ENST00000588550.1 LINC00484-208

Summary

About Us

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