Transcript: ENST00000656343.1

Description

novel transcript

Location

Chromosome 20: 52,671,815-52,699,472 forward strand.

About this transcript

This transcript has 8 exons, is associated with 11736 variant alleles and maps to 235 oligo probes.

Gene

This transcript is a product of gene ENSG00000232294.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000661770.1	-	906	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000662129.1	-	1766	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000662618.1	-	1644	No protein	-	lncRNA	-	-
ENST00000664050.1	-	1607	No protein	-	lncRNA	-	-
ENST00000661304.1	-	1547	No protein	-	lncRNA	-	-
ENST00000666117.1	-	1463	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000653784.1	-	1431	No protein	-	lncRNA	-	-
ENST00000654945.1	-	1383	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000653245.1	-	1360	No protein	-	lncRNA	-	-
ENST00000670088.1	-	1344	No protein	-	lncRNA	-	-
ENST00000661421.1	-	1309	No protein	-	lncRNA	-	-
ENST00000669032.1	-	1293	No protein	-	lncRNA	-	-
ENST00000661530.1	-	1291	No protein	-	lncRNA	-	-
ENST00000655419.1	-	1291	No protein	-	lncRNA	-	-
ENST00000666070.1	-	1142	No protein	-	lncRNA	-	-
ENST00000668673.1	-	1120	No protein	-	lncRNA	-	-
ENST00000656343.1	-	1084	No protein	-	lncRNA	-	-
ENST00000425279.6	-	1058	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000661373.1	-	974	No protein	-	lncRNA	-	-
ENST00000448013.6	-	950	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000663531.1	-	914	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000659204.1	-	658	No protein	-	lncRNA	-	-
ENST00000413070.2	-	631	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000663698.1	-	527	No protein	-	lncRNA	-	-
ENST00000421642.5	-	486	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000669548.1	-	468	No protein	-	lncRNA	-	-
ENST00000422666.1	-	374	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000437987.1	-	182	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,

Summary

Statistics

Exons: 8, Coding exons: 0, Transcript length: 1,084 bps,

Version

ENST00000656343.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000656343.1

Summary

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Transcript: ENST00000656343.1

Summary

About Us

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