Transcript: ENST00000291374.11 LINC02418-201

Description

long intergenic non-protein coding RNA 2418 [Source:HGNC Symbol;Acc:HGNC:53348]

Location

Chromosome 12: 130,033,454-130,042,342 reverse strand.

About this transcript

This transcript has 3 exons, is associated with 3882 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSG00000214039.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715403.1	LINC02418-206	1251	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENST00000567788.1	LINC02418-203	4592	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000660273.1	LINC02418-204	4235	No protein	-	lncRNA	-	-
ENST00000291374.11	LINC02418-201	3569	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000715402.1	LINC02418-205	1352	No protein	-	lncRNA	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000561864.1	LINC02418-202	577	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 3,569 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000291374.11

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000291374.11 LINC02418-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000291374.11 LINC02418-201

Summary

About Us

Get help

Our sister sites

Follow us