Transcript: ENST00000687084.1 IZUMO1R-203

Description

IZUMO1 receptor, JUNO [Source:HGNC Symbol;Acc:HGNC:32565]

Gene Synonyms

FOLBP3, FOLR4, JUNO

Location

Chromosome 11: 94,304,580-94,308,146 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 1905 variant alleles and maps to 194 oligo probes.

Gene

This transcript is a product of gene ENSG00000183560.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000687084.1	IZUMO1R-203	1513	250aa	ENSP00000510041.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS81615	A6ND01-1	NM_001199206.4	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000328458.6	IZUMO1R-201	1252	250aa	ENSP00000332963.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS81615	A6ND01-1	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000440961.6	IZUMO1R-202	805	243aa	ENSP00000416935.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A6ND01-2	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,513 bps, Translation length: 250 residues

MANE

This MANE Select transcript contains ENSP00000510041 and matches to NM_001199206.4 and NP_001186135.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: A6ND01

CCDS

This transcript is a member of the Human CCDS set: CCDS81615

Version

ENST00000687084.1

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000687084.1 IZUMO1R-203

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Transcript: ENST00000687084.1 IZUMO1R-203

Summary

About Us

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