Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
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Transcript: FBtr0085505 Vps13B-RA

Description

Vacuolar protein sorting 13B

Gene Synonyms

Vps13B

Location

About this transcript

This transcript has 14 exons, is annotated with 16 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0085505	Vps13B-RA	11469	3731aa	FBpp0084871	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VEU8 Q9VAD3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
FBtr0300825	Vps13B-RB	2309	529aa	FBpp0290049	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1RKY3	-

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 11,469 bps, Translation length: 3,731 residues

Version

FBtr0085505

Type

Protein coding

Annotation Method

Feature imported from FlyBase.