Transcript: FBtr0078397 CG5664-RA

Gene Synonyms

CG5664

Location

About this transcript

This transcript has 3 exons, is annotated with 4 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0078397	CG5664-RA	2621	711aa	FBpp0078051	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q960G7 Q9VP36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
FBtr0331822	CG5664-RB	2630	443aa	FBpp0304206	Gene/transcipt that contains an open reading frame (ORF).Protein coding	M9PIG0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,621 bps, Translation length: 711 residues

Version

FBtr0078397

Type

Protein coding

Annotation Method

Feature imported from FlyBase.