Transcript: FBtr0300721 Sprn-RB

Description

Spermitin

Gene Synonyms

Sprn

Location

Primary_assembly 3L: 11,879,174-11,881,182 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features and maps to 26 oligo probes.

Gene

This transcript is a product of gene FBgn0036218 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0332127	Sprn-RF	1950	579aa	FBpp0304437	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JHY2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
FBtr0300721	Sprn-RB	1901	562aa	FBpp0289945	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VTQ2	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0300724	Sprn-RE	1898	561aa	FBpp0289948	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V503	-
FBtr0300722	Sprn-RC	1847	544aa	FBpp0289946	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q4V4X9 Q4V542	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,901 bps, Translation length: 562 residues

Version

FBtr0300721

Type

Protein coding

Annotation Method

Feature imported from FlyBase.

Transcript: FBtr0300721 Sprn-RB

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Transcript: FBtr0300721 Sprn-RB

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