Transcript: FBtr0273367 Setx-RB

Description

Senataxin

Gene Synonyms

Setx

Location

About this transcript

This transcript has 8 exons, is annotated with 32 domains and features and maps to 30 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0273367	Setx-RB	5627	1676aa	FBpp0271875	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B7Z0D7 D2NUE4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
FBtr0273368	Setx-RC	4831	1417aa	FBpp0271876	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VSE1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 8, Coding exons: 7, Transcript length: 5,627 bps, Translation length: 1,676 residues

Version

FBtr0273367

Type

Protein coding

Annotation Method

Feature imported from FlyBase.