Transcript: FBtr0074784 pcm-RA

Description

pacman

Gene Synonyms

pcm

Location

About this transcript

This transcript has 11 exons, is annotated with 36 domains and features and maps to 32 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0302082	pcm-RB	5384	1613aa	FBpp0291292	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1JJR3 Q9XZU2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0074784	pcm-RA	5260	1612aa	FBpp0074553	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9VWI1	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 5,260 bps, Translation length: 1,612 residues

Version

FBtr0074784

Type

Protein coding

Annotation Method

Feature imported from FlyBase.