Transcript: FBtr0340287 Elk-RB

Description

Eag-like K[+] channel

Gene Synonyms

Elk

Location

About this transcript

This transcript has 17 exons, is annotated with 56 domains and features and maps to 45 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0086802	Elk-RA	5184	1284aa	FBpp0085981	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A1ZB14 C4IXY2 C7LA62 Q23974	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
FBtr0340287	Elk-RB	5336	1283aa	FBpp0309248	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0B4LGW2	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 17, Coding exons: 15, Transcript length: 5,336 bps, Translation length: 1,283 residues

Version

FBtr0340287

Type

Protein coding

Annotation Method

Feature imported from FlyBase.