Transcript: FBtr0082666 kar-RA

Description

karmoisin

Gene Synonyms

kar

Location

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features and maps to 28 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
FBtr0302563	kar-RB	2321	612aa	FBpp0291719	Gene/transcipt that contains an open reading frame (ORF).Protein coding	C8VV48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
FBtr0082666	kar-RA	2176	553aa	FBpp0082135	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q95SN6 Q9VG39	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 2,176 bps, Translation length: 553 residues

Version

FBtr0082666

Type

Protein coding

Annotation Method

Feature imported from FlyBase.