Transcript: ENSDART00000166411.2 uba2-202

Description

ubiquitin-like modifier activating enzyme 2 [Source:NCBI gene;Acc:406672]

Gene Synonyms

sae2, sae2b, uble1b, wu:fi17g06, zgc:66354

Location

Chromosome 25: 12,814,483-12,822,239 reverse strand.

About this transcript

This transcript has 10 exons, is annotated with 11 domains and features, is associated with 259 variant alleles and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000101332.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171801.2	uba2-204	2151	650aa	ENSDARP00000139796.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000169126.2	uba2-203	2402	640aa	ENSDARP00000130924.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7SXG4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000166411.2	uba2-202	1113	371aa	ENSDARP00000140060.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IV65	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000161452.2	uba2-201	598	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 1,113 bps, Translation length: 371 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000166411.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000166411.2 uba2-202

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Transcript: ENSDART00000166411.2 uba2-202

Summary

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