Transcript: ENSDART00000114172.4 pde6d-201

Description

phosphodiesterase 6D, cGMP-specific, rod, delta [Source:ZFIN;Acc:ZDB-GENE-040718-463]

Gene Synonyms

zgc:92605

Location

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 256 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000114172.4	pde6d-201	1085	150aa	ENSDARP00000102162.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QZ52	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150083.2	pde6d-202	351	109aa	ENSDARP00000125061.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W5K7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,085 bps, Translation length: 150 residues

Version

ENSDART00000114172.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.