Transcript: ENSDART00000142836.2 itpr3-201

Description

inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]

Gene Synonyms

si:dkey-163f12.8

Location

About this transcript

This transcript has 48 exons, is annotated with 38 domains and features, is associated with 1564 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000167718.2	itpr3-203	9167	2634aa	ENSDARP00000133340.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IH08	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142836.2	itpr3-201	7368	2293aa	ENSDARP00000116513.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R1L5	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144488.3	itpr3-202	1319	332aa	ENSDARP00000123064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q5E3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 48, Coding exons: 48, Transcript length: 7,368 bps, Translation length: 2,293 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000142836.2

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.