Transcript: ENSDART00000078908.7 usp1-201

Description

ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]

Gene Synonyms

wu:fb43a02, zgc:55962

Location

About this transcript

This transcript has 9 exons, is annotated with 27 domains and features, is associated with 238 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078908.7	usp1-201	3347	772aa	ENSDARP00000073367.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QNF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000151002.2	usp1-203	541	134aa	ENSDARP00000126161.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT99	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133162.3	usp1-202	718	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 3,347 bps, Translation length: 772 residues

Version

ENSDART00000078908.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.