Transcript: ENSDART00000078396.5 hmbsb-201

Description

hydroxymethylbilane synthase, b [Source:ZFIN;Acc:ZDB-GENE-050522-491]

Gene Synonyms

hmbsl, id:ibd5004, im:7140060, zgc:110690

Location

About this transcript

This transcript has 14 exons, is annotated with 21 domains and features, is associated with 3 variant alleles and maps to 200 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000078396.5	hmbsb-201	2702	360aa	ENSDARP00000072858.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R6A1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152543.3	hmbsb-203	858	286aa	ENSDARP00000126804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	R4GE91	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000144685.2	hmbsb-202	745	231aa	ENSDARP00000120095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QDE4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 14, Coding exons: 14, Transcript length: 2,702 bps, Translation length: 360 residues

Version

ENSDART00000078396.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.