Transcript: ENSDART00000145886.3 osbpl3b-201

Description

oxysterol binding protein-like 3b [Source:ZFIN;Acc:ZDB-GENE-090109-1]

Gene Synonyms

si:dkey-15j7.2

Location

Chromosome 16: 21,242,491-21,418,655 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 21 domains and features, is associated with 1700 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000040482.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000145886.3	osbpl3b-201	4352	882aa	ENSDARP00000119126.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2E5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000183267.1	osbpl3b-202	3856	829aa	ENSDARP00000153149.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QL19	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000191285.1	osbpl3b-203	3748	793aa	ENSDARP00000153514.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QKH3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 23, Coding exons: 22, Transcript length: 4,352 bps, Translation length: 882 residues

Version

ENSDART00000145886.3

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000145886.3 osbpl3b-201

Summary

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Transcript: ENSDART00000145886.3 osbpl3b-201

Summary

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