Transcript: ENSDART00000011480.8 zdhhc2-201

Description

zinc finger DHHC-type palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050320-58]

Gene Synonyms

wu:fk53a02, zgc:110777

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 1470 variant alleles and maps to 226 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000011480.8	zdhhc2-201	2610	361aa	ENSDARP00000019867.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5BLG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173273.2	zdhhc2-203	514	46aa	ENSDARP00000142183.1	Nonsense mediated decay	A0A140LG06	-
ENSDART00000173012.2	zdhhc2-202	775	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,610 bps, Translation length: 361 residues

Version

ENSDART00000011480.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.