Transcript: ENSDART00000017838.10 safb-201

Description

scaffold attachment factor B [Source:ZFIN;Acc:ZDB-GENE-030131-698]

Gene Synonyms

wu:fb40a03, wu:fd42g06, zgc:55387

Location

About this transcript

This transcript has 21 exons, is annotated with 44 domains and features, is associated with 152 variant alleles and maps to 330 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000017838.10	safb-201	3020	855aa	ENSDARP00000005702.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LV81	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130238.3	safb-202	645	200aa	ENSDARP00000105357.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FFA2	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000140918.2	safb-203	843	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 21, Coding exons: 21, Transcript length: 3,020 bps, Translation length: 855 residues

Version

ENSDART00000017838.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.