Transcript: ENSDART00000186387.1 tcea1-202

Description

transcription elongation factor A (SII), 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8049]

Gene Synonyms

fj48e12, wu:fj48e12, zgc:63975

Location

About this transcript

This transcript has 9 exons, is annotated with 30 domains and features, is associated with 245 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101861.6	tcea1-201	1892	309aa	ENSDARP00000092636.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7T3C1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000186387.1	tcea1-202	2966	311aa	ENSDARP00000147345.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q7Y8	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 2,966 bps, Translation length: 311 residues

Version

ENSDART00000186387.1

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.