Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: zgc:163098 ENSDARG00000078911

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Description

zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]

Location

Chromosome 5: 37,290,260-37,312,953 forward strand.

GRCz11:CM002889.2

About this gene

This gene has 3 transcripts (splice variants), 77 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113642.4	zgc:163098-201	3117	874aa	ENSDARP00000101139.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PN19	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000114671.4	zgc:163098-202	1104	367aa	ENSDARP00000097831.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQI7	-
ENSDART00000122919.3	zgc:163098-203	812	218aa	ENSDARP00000110081.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QSP9	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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