Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: arhgef9a ENSDARG00000061746

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Description

Cdc42 guanine nucleotide exchange factor (GEF) 9a [Source:ZFIN;Acc:ZDB-GENE-070705-271]

Gene Synonyms

si:ch73-92i20.3, si:cu137718.3

Location

Chromosome 5: 21,939,733-22,001,053 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 4 transcripts (splice variants), 39 orthologues and 35 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143878.4	arhgef9a-203	3022	549aa	ENSDARP00000118893.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHS5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182907.1	arhgef9a-204	1548	516aa	ENSDARP00000145990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q4X7	-
ENSDART00000134393.2	arhgef9a-201	890	250aa	ENSDARP00000112792.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QEP1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000142199.2	arhgef9a-202	679	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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