Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: tpma ENSDARG00000033683

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Description

alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]

Location

Chromosome 7: 29,951,997-29,962,080 forward strand.

GRCz11:CM002891.2

About this gene

This gene has 10 transcripts (splice variants), 286 orthologues, 5 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000173453.2	tpma-202	3089	284aa	ENSDARP00000142967.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P13104	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000039657.9	tpma-201	812	205aa	ENSDARP00000039656.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000173906.2	tpma-209	753	209aa	ENSDARP00000142950.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173904.2	tpma-208	751	221aa	ENSDARP00000142715.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173540.2	tpma-204	721	178aa	ENSDARP00000142649.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173940.2	tpma-210	639	171aa	ENSDARP00000142778.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173772.2	tpma-207	631	171aa	ENSDARP00000142761.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173506.2	tpma-203	529	135aa	ENSDARP00000142952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000173686.2	tpma-205	487	162aa	ENSDARP00000142833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000173737.2	tpma-206	402	134aa	ENSDARP00000142776.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

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Summary

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