Gene: rbck1 ENSDARG00000031954

Description

RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]

Gene Synonyms

zgc:91964

Location

Chromosome 22: 10,145,098-10,165,446 reverse strand.

GRCz11:CM002906.2

About this gene

This gene has 6 transcripts (splice variants), 300 orthologues, 3 paralogues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000047444.8	rbck1-201	2629	515aa	ENSDARP00000047443.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168304.2	rbck1-206	1571	515aa	ENSDARP00000140102.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6GMF9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144209.2	rbck1-204	518	173aa	ENSDARP00000113670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRZ7	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000142012.2	rbck1-203	493	99aa	ENSDARP00000119127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LXG6	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152042.2	rbck1-205	204	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000141469.3	rbck1-202	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Gene: rbck1 ENSDARG00000031954

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Gene: rbck1 ENSDARG00000031954

Summary

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