Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: plxnc1 ENSDARG00000015278

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Description

plexin C1 [Source:ZFIN;Acc:ZDB-GENE-030131-1620]

Gene Synonyms

fb76c04, si:dkeyp-90a8.2, wu:fb76c04

Location

Chromosome 4: 18,281,954-18,315,912 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 3 transcripts (splice variants), 229 orthologues and 14 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135735.2	plxnc1-202	3171	1056aa	ENSDARP00000115802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RGW1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000004222.9	plxnc1-201	3265	464aa	ENSDARP00000011546.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QS13	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189084.1	plxnc1-203	1963	387aa	ENSDARP00000156547.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QT09	-

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Summary

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