Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: COL6A1 ENSCAFG00000011911

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Description

collagen type VI alpha 1 chain [Source:VGNC Symbol;Acc:VGNC:39480]

Location

Primary_assembly 31: 38,528,493-38,546,910 forward strand.

Dog10K_Boxer_Tasha:CM000031.4

About this gene

This gene has 3 transcripts (splice variants) and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00000107848.1	COL6A1-201	5118	1087aa	ENSCAFP00000074788.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0TU51	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00000109381.1	COL6A1-202	4382	931aa	ENSCAFP00000068974.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8P0PII6	-
ENSCAFT00000018918.5	COL6A1-203	3883	1026aa	ENSCAFP00000017530.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0Z1U8 A0A8I3S7Z3	-

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Summary

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