Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: HMGB1 ENSCAFG00030022196

Description

high mobility group box 1 [Source:NCBI gene (formerly Entrezgene);Acc:403170]

Gene Synonyms

HMG1

Location

Basenji_breed-1.1:CM016455.1

About this gene

This gene has 2 transcripts (splice variants).

Transcripts

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSCAFT00030040789.1	HMGB1-201	2339	215aa	ENSCAFP00030035595.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6YKA4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSCAFT00030040805.1	HMGB1-202	656	159aa	ENSCAFP00030035610.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8C0PIN2 A0A8I3PE06	-

Breeds

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.