Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: F54A5.3b.3

Description

SHC-transforming protein homolog 1 [Source:NCBI gene;Acc:3565745]

Location

About this transcript

This transcript has 4 exons, is annotated with 14 domains and features and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
F54A5.3b.1	-	5250	227aa	F54A5.3b.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-
F54A5.3b.2	-	1750	227aa	F54A5.3b.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-
F54A5.3a.1	-	1624	316aa	F54A5.3a.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
F54A5.3b.3	-	1407	227aa	F54A5.3b.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9TYT3	-
F54A5.3g	-	4585	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3c	-	1097	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3d	-	1087	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3f	-	947	No protein	-	A non-coding gene.ncRNA	-	-
F54A5.3e	-	811	No protein	-	A non-coding gene.ncRNA	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 1,407 bps, Translation length: 227 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9TYT3

Version

F54A5.3b.3

Type

Protein coding

Annotation Method

Protein-coding model imported from WormBase