Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: MSH4 ENSBTAG00000018448

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Description

mutS homolog 4 [Source:VGNC Symbol;Acc:VGNC:31695]

Location

Primary_assembly 3: 68,961,718-69,055,671 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 4 transcripts (splice variants), 201 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000117640.1	MSH4-202	3979	934aa	ENSBTAP00000077688.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000132547.1	MSH4-201	3738	879aa	ENSBTAP00000089578.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000024552.6	MSH4-204	3628	912aa	ENSBTAP00000024552.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BK76	-
ENSBTAT00000126165.1	MSH4-203	3622	870aa	ENSBTAP00000085421.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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