Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: RPL36A ENSBTAG00000019253

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Description

ribosomal protein L36a-like [Source:NCBI gene (formerly Entrezgene);Acc:508165]

Location

Primary_assembly X: 50,819,017-50,822,661 reverse strand.

ARS-UCD1.3:CM008197.2

About this gene

This gene has 3 transcripts (splice variants), 23 orthologues and 3 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000078960.1	RPL36A-203	474	157aa	ENSBTAP00000062069.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LXV7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000063926.3	RPL36A-202	664	142aa	ENSBTAP00000056251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3ZCJ0	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000025633.5	RPL36A-201	514	129aa	ENSBTAP00000025633.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3SZ59	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data