Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
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Ontologies
Phenotypes
Genetic Variation
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Pathway
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External references
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ID History
- Gene history

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Gene: AMDHD1 ENSBTAG00000016275

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Description

amidohydrolase domain containing 1 [Source:VGNC Symbol;Acc:VGNC:25860]

Location

Primary_assembly 5: 60,232,127-60,270,671 forward strand.

ARS-UCD1.3:CM008172.2

About this gene

This gene has 6 transcripts (splice variants) and 200 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000114828.1	AMDHD1-203	2300	531aa	ENSBTAP00000092626.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000021647.7	AMDHD1-206	2043	496aa	ENSBTAP00000021647.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PJV3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000131515.1	AMDHD1-204	1969	434aa	ENSBTAP00000078190.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000090961.1	AMDHD1-202	1904	399aa	ENSBTAP00000092833.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000106972.1	AMDHD1-201	1891	391aa	ENSBTAP00000091801.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSBTAT00000089791.1	AMDHD1-205	1883	392aa	ENSBTAP00000096652.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data