Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Cellular component
- GO: Molecular function
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: TNFRSF12A ENSBTAG00000012082

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Description

TNF receptor superfamily member 12A [Source:VGNC Symbol;Acc:VGNC:36162]

Location

Primary_assembly 25: 2,435,850-2,439,851 forward strand.

ARS-UCD1.3:CM008192.2

About this gene

This gene has 4 transcripts (splice variants) and 86 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000081383.2	TNFRSF12A-204	1140	181aa	ENSBTAP00000058476.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LHY0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSBTAT00000098327.1	TNFRSF12A-201	1361	150aa	ENSBTAP00000101388.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSBTAT00000081941.1	TNFRSF12A-202	1006	127aa	ENSBTAP00000069730.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1NDW9	-
ENSBTAT00000016020.7	TNFRSF12A-203	942	94aa	ENSBTAP00000016020.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E1BJH6	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data