Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: KIF1A ENSBTAG00000011538

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Description

kinesin family member 1A [Source:VGNC Symbol;Acc:VGNC:30590]

Location

Primary_assembly 3: 120,041,605-120,127,806 reverse strand.

ARS-UCD1.3:CM008170.2

About this gene

This gene has 5 transcripts (splice variants), 210 orthologues and 42 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000071007.2	KIF1A-201	6557	1795aa	ENSBTAP00000063995.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1M6P0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000015335.7	KIF1A-202	6533	1787aa	ENSBTAP00000015335.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1MLY0	-
ENSBTAT00000079498.2	KIF1A-203	6506	1778aa	ENSBTAP00000065684.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAR0	-
ENSBTAT00000079020.2	KIF1A-204	6344	1724aa	ENSBTAP00000067609.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1MAH5	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSBTAT00000081585.2	KIF1A-205	6293	1707aa	ENSBTAP00000061454.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q1LVL3	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data