Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Molecular function
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ARCN1 ENSBTAG00000006690

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Description

archain 1 [Source:VGNC Symbol;Acc:VGNC:26057]

Location

Primary_assembly 15: 29,227,702-29,256,357 forward strand.

ARS-UCD1.3:CM008182.2

About this gene

This gene has 3 transcripts (splice variants) and 229 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSBTAT00000074257.2	ARCN1-203	2207	543aa	ENSBTAP00000071995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P53619	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSBTAT00000008799.5	ARCN1-201	2252	511aa	ENSBTAP00000008799.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P53619	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSBTAT00000113422.1	ARCN1-202	390	82aa	ENSBTAP00000082199.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Breeds

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data